Medical Microbiology and Infectious Diseases

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Date	Time	Lecture	Faculty	PDF	PPT	Reading*	Assignments
9/14	10:00	Introduction to MMID	Gulig		X
	11:00	Intro I: virus structure and classification	Condit	X	X	S1, S31	Introductory BUGS Cases: Annie Brown, Transplant Disaster
9/15	1:00	Intro II: laboratory virology	Condit	X	X	S31
9/16	11:00	Intro III: pathogenesis & genetics	Condit	X	X	S31
	1:00	DNA viruses I: papillomaviruses	Condit	X	X	S40
9/17	11:00	DNA viruses II: adeno, parvo and polyomaviruses	Condit	X	X	S39
	1:00	(-) RNA viruses I: influenza virus	Condit	X	X	S36
9/18	11:00	Current topics I - Avian flu	Faculty

9/21	11:00	(-) RNA viruses II: measles, mumps, parainfluenza and respiratory syncytial viruses	Condit	X	X	S34	Joe Gasper (see also cme.ufl.edu/media/flu/) Coughing Baby too; Mama Doc; Snappy Mexican; Day Care Diarrhea
9/22	11:00	(-) RNA viruses III: rhabdovirus (rabies) and reoviruses (rotavirus, diarrhea)	Condit	X	X	S35, S37
9/23		No MMID
9/24	10:00	(+) RNA viruses I: enteroviruses, rhinoviruses	Bloom	X	X	S32, S37
9/25		No MMID

9/28	1:00	(+) RNA viruses II: rubella, encephalitis	Bloom	X	X	S33, S72	Quoth the Raven; Annie Brown; Osculating Infection; See Dick, See Jane
9/29	11:00	(+) RNA viruses III: hepatitis	Bloom	X	X	S43
	1:00	Clinical correlation: diarrhea	Forsmark	X	X
9/30	11:00	Clinical correlation: hepatitis	Nelson	X	X
	1:00	Reverse transcribing viruses I: hepatitis B	Bloom	X	X	S43
10/1	11:00	Reverse transcribing viruses II: HIV	Bloom	X	X	S38
	1:00	Clinical correlation: AIDS	Duff	X	X
10/2	11:00	Current topics II - Prions as infectious agents	Faculty
	1:00	DNA viruses III: herpes	Bloom	X	X	S41, S42
	2:00	Clinical correlation: herpes	Swaminathan	X	X

10/5	10:00	Clinical correlation: congenital infections	Duff	X	X
	11:00	Infection control and bioterrorism	Bloom	X	X	S44, S45, S57
10/6	10:00	Emerging infections	Bloom	X	X	S57, S73
	11:00	Current topics III - smallpox vaccine	Faculty
	11:00	Summary	Bloom, Condit	X	X
10/7		No MMID
10/8		No MMID
10/9	11:30	Exam 1

10/12	10:00	Introduction to Bacteriology	Gulig	X	X	S3	Breathing Problem; Farmer Brown Antimicrobial Warmup due Oct. 19.
	11:00	Bacteriology - Structure	Gulig	"	"	"
	1:00	Bacterial Physiology	Gulig	"	"	"
10/13		No MMID
10/14		No MMID
10/15	11:00	Bacterial Genetics	Gulig	"	X	"
	1:00	Antimicrobial Therapy	Gulig	"	"	S5, S30, I-1
10/16		Homecoming

10/19	11:00	Bacterial Genetics, Antibiotic Resistance	Gulig	"	"		Antimicrobial Warmup due Oct. 19. Intro. to Upper Respiratory Tract Infections; Sad Sore Throat; Coughing Baby; Coughing Baby Too (review) Virtual Microbiology Lab (complete before October 28, 5:00) You should use the Streptococcus pyogenes web page as a self-teaching tool in conjunction with the Schaecter and other relevant lectures. See also an online supplemental text document.
10/20	10:00	Bacterial Pathogenesis 1 Pathogenesis Web Page	Gulig	"	X	S1,S2,S8, S9, S59
	11:00	Clinical aspects of antibiotics and resistance Antibiotic summary table	Southwick	X		I-1
	2:00	Bacterial Pathogenesis 2 S. pyogenes Web Page	Gulig	X	X	S6,S7 Review Immunology
10/21	10:00	Bacterial Classification	Jin	X	X
	11:00	Diagnosis	Jin	"	"	S10
10/22	11:00	Classification and Disease	Ramphal	X	X
	1:00	Sepsis	Ramphal	X	X
10/23	1:00	Clinical Diagnosis	Southwick and ID Faculty			S58

10/26	1:00	URI Organisms	Jin	X	X	S62	Virtual Microbiology Lab (complete before October 30, 5:00 Intro. to Pneumonia Smoking Colonel; Achey Amoeba Chilled Construction Worker; Joe Gasper (review); John Dough; Cindy Fairis
10/27	11:00	LRT Organisms	Jin	X	X	S62
	1:00	URI-Strep	Lawrence	X	X	CMC1 warm-up due 5:00
10/28	11:00	Pneumonia	Southwick	X		I-p. 79-99
	1:00	TB	Islam	X		I-p. 103-119
10/29	1:00 to 2:50	CMC-1 Respiratory Infections	ID faculty*	X
10/30	3:00	Review	Gulig

11/2	12:30	Exam 2					Introduction to Endocarditis, Tired Phage Therapist Introduction to Brain and Meningeal Infections (CNS), Stillborn Twin Sick Baby Intro. to Gastrointestinal Dis., Pasteur-ized Chef, Caesar Salad's Revenge, Day Care Diarrhea (review)
11/3	11:00	Otitis, Sinusitis, Meningitis Organisms	Gulig	X	X	S12,S13,S14, S61, S68
	1:00	Endocarditis	xx	X
11/4	11:00	Enteric Organisms and Infections 1	Gulig	X	X	S76, S11, S16, S17, S20
	1:00	Otitis and Sinusitis Infections	Antonelli	X	X	CMC3 warm-up due 5:00
11/5	11:00	Meningitis	Southwick	X		I-6
	1:00	CMC-2 Endocarditis	ID faculty*
11/6	11:00	Enteric Organisms and Infections 2	Gulig	X	X	Vibrio cholerae web learning

11/9	11:00	Enteric Organisms and Infections 3	Gulig	"	"	Salmonella web page	Intro. to Zoonotic Diseases, Bull's Eye, Spotted Palms, Snake Hunter, Dumpster Kitty Joe Gloveless Great Boar Hunter Introduction to Skin Infections, Weak Weight Lifter Thorny Problem, Oiled Umbilicus
11/10	11:00	Enteric infections	Forsmark	X	X
	1:00	CMC-3 CNS Infections	ID faculty*			CMC4 warm-up due 5:00 I-6
11/11		Veteran's Day
11/12	11:00	Zoonoses	Gulig Yersinia self study exercise	X	X	S73, S25, S26, S28, S57 Lyme disease web page
11/13	11:00	Skin Pathogens	Jin	X	X
	1:00	CMC-4 GI Infections	ID faculty*

11/16		No MMID					Introduction to Genital and Urinary Tract Infections, Suspicious Spots, Leaky Faucet, Pain in the Side, See Dick, See Jane (review)
11/17	10:00	STD Video	Poff	X	X
11/18	10:00	STD Infections	Duff	X	X	CMC5 warm-up due 5:00
11/19	11:00	UTI	Schain	X
	1:00	CMC-5 GU Infections	ID faculty*
11/20		No MMID

11/23	1:00	Review	Gulig
11/24		No MMID
11/25	11:30	Exam 3
11/26		Thanksgiving
11/27		Thanksgiving

11/30	11:00	Mycology 1	Lewin	X	X	S46-50	Mycology Cases: Round Rash; Bats in the Belfry; Here Pretty Pigeon Parasitology Cases: Kiss of Death; Pharaoh's Revenge; Windy Professor, Pain in the Galapagos; Feverish Seaman; Blocked Bowel; Pain in the Missionary; Ants in the Pants?; Whipped!
	1:00	Mycology 2	Wingard	X	X	"
	2:00	Parasites 1 Entamoeba page Ascaris page	Gulig	X	X	S51-55
12/1	11:00	Parasites 2	Gulig	"	"	Bed Bug Page
12/2	1:00	Parasites 3	Archibald	X	X
12/3	1:00	Parasites 4	Archibald	"	"
12/4	1:00	ID Patient Presentation	Duff

12/7	3:00	Review/Q&A	Gulig
12/10	10:00	Exam 4
12/11	8:00	Final Exam - NMBE

*Reading: S=Schaecter, I=Infectious Disease- A Short Course, # refers to chapter

1. BUGS Cases - Complete these exercises during the suggested time frame in the schedule above. Cases that are underlined have unique material that is covered on exams. None of the cases for virology are assigned. Note that we take note of material that is reinforced in the BUGS and lecture.

3. Virtual Microbiology Lab - Due Oct. 30, 5:00 p.m. - Key - We lost our wet lab years ago. The Virtual Microbiology Lab enables you to go through exactly the same decision making process, data evaluation, and diagnostics as our former wet lab. You will need to know this information for our exams and exams administered by "other people". You must complete the lab by the deadline - part of the physician scholar competency evaluation. Work in groups if you want, submit individually.

3. Clinical Microbiology Conferences (CMC) - You have been assigned groups. Look over the Pre-CMC material, read the appropriate material from Infectious Disease in 30 Days, and submit the Pre-CMC Warmup by the assigned day (see schedule above). Your faculty leader may assign students to present cases or answer specific questions. This material is covered on our exams in the form of essay questions.
     Introduction
     CMC Group Assignments
     CMC Materials:
            CMC 1 - Pneumonias (Oct. 29, 1:00); Pre-CMC Warmup due Oct. 28, 5:00
            CMC 2 - Endocarditis (Nov. 5, 1:00); Pre-CMC Warmup due Nov. 3, 5:00
            CMC 3 - CNS Infections (Nov. 10, 1:00); Pre-CMC Warmup due Nov. 5, 5:00
            CMC 4 - GI Infections (Nov. 13, 1:00); Pre-CMC Warmup due Nov. 12, 5:00
            CMC 5 - GU Infections (Nov. 19, 1:00); Pre-CMC Warmup due Nov. 19, 5:00