Medical Microbiology and Infectious Diseases

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Date	Time	Lecture	Faculty	PDF	PPT	Reading*	Assignments
9/14	11:00	Introduction to MMID	Gulig		X
	1:00	Intro I: virus structure and classification	Condit	X	X	S1, S31	None of the BUGS cases are mandatory for virology. Introductory BUGS Cases: Annie Brown, Transplant Disaster
9/15	1:00	Intro II: laboratory virology	Condit	X	X	S31
9/16	11:00	Intro III: pathogenesis & genetics	Condit	X	X	S31
	1:00	DNA viruses I: papillomaviruses	Condit	X	X	S40
9/17	11:00	DNA viruses II: adeno, parvo and polyomaviruses	Condit	X	X	S39
	1:00	(-) RNA viruses I: influenza virus	Condit	X	X	S36
9/18	11:00	Current topics I - Avian flu	Faculty

9/21	11:00	(-) RNA viruses II: measles, mumps, parainfluenza and respiratory syncytial viruses	Condit	X	X	S34	Joe Gasper (see also cme.ufl.edu/media/flu/) Coughing Baby too; Mama Doc; Snappy Mexican; Day Care Diarrhea
9/22	11:00	(-) RNA viruses III: rhabdovirus (rabies) and reoviruses (rotavirus, diarrhea)	Condit	X	X	S35, S37
9/23		No MMID
9/24	10:00	(+) RNA viruses I: enteroviruses, rhinoviruses	Bloom	X	X	S32, S37
9/25		No MMID

9/28	1:00	(+) RNA viruses II: rubella, encephalitis	Bloom	X	X	S33, S72	Quoth the Raven; Annie Brown; Osculating Infection; See Dick, See Jane
9/29	11:00	(+) RNA viruses III: hepatitis	Bloom	X	X	S43
	1:00	Clinical correlation: diarrhea	Forsmark	X	X
9/30	11:00	Clinical correlation: hepatitis	Nelson	X	X
	1:00	Reverse transcribing viruses I: hepatitis B	Bloom	X	X	S43
10/1	11:00	Reverse transcribing viruses II: HIV	Bloom	X	X	S38
	1:00	Clinical correlation: AIDS	Duff	X	X
10/2	11:00	Current topics II - Prions as infectious agents	Faculty	Wu/Snyder Group for Oct. 2 is back in MDL2
	1:00	DNA viruses III: herpes	Bloom	X	X	S41, S42
	2:00	Clinical correlation: herpes	Swaminathan	X	X

10/5	10:00	Clinical correlation: congenital infections	Duff	X	X
	11:00	Infection control and bioterrorism	Bloom	X	X	S44, S45, S57
10/6	10:00	Emerging infections	Bloom	X	X	S57, S73
	11:00	Current topics III - smallpox vaccine	Faculty
10/7		No MMID
10/8	1:00	Summary	Bloom, Condit	X	X
10/9	11:30	Exam 1

10/12	10:00	Introduction to Bacteriology	Gulig	X	X	S3	Breathing Problem; Farmer Brown Antimicrobial Warmup due Oct. 19.
	11:00	Bacteriology - Structure	Gulig	"	"	"
	1:00	Bacterial Physiology	Gulig	"	"	"
10/13		No MMID
10/14		No MMID
10/15	11:00	Bacterial Genetics	Gulig	"	X	"
	1:00	Antimicrobial Therapy	Gulig	"	"	S5, S30, I-1
10/16		Homecoming

10/19	11:00	Bacterial Genetics, Antibiotic Resistance	Gulig	"	"		Antimicrobial Warmup due Oct. 19. Intro. to Upper Respiratory Tract Infections; Sad Sore Throat; Coughing Baby; Coughing Baby Too (review) Virtual Microbiology Lab (complete before October 28, 5:00) You should use the Streptococcus pyogenes web page as a self-teaching tool in conjunction with the Schaecter and other relevant lectures. See also an online supplemental text document.
10/20	10:00	Bacterial Pathogenesis 1 Pathogenesis Web Page	Gulig	"	X	S1,S2,S8, S9, S59
	11:00	Clinical aspects of antibiotics and resistance Antibiotic summary table	Southwick	X		I-1
	2:00	Bacterial Pathogenesis 2 S. pyogenes Web Page	Gulig	X	X	S6,S7 Review Immunology
10/21	10:00	Bacterial Classification	Jin	X	X
	11:00	Diagnosis	Jin	"	"	S10
10/22	11:00	Classification and Disease	Ramphal	X	X
	1:00	Sepsis	Ramphal	X	X 09
10/23	1:00	Clinical Diagnosis	Southwick and ID Faculty			S58

10/26	2:00	URI Organisms	Jin	X	X	S62	Virtual Microbiology Lab (complete before October 28, 5:00 Intro. to Pneumonia Smoking Colonel; Achey Amoeba Chilled Construction Worker; Joe Gasper (review); John Dough; Cindy Fairis
	3:00	LRT Organisms	Jin	X	X	S62
10/27	11:00	URI-Strep	Lew	X	X	CMC1 warm-up due 5:00
	1:00	TB	Islam	X	X	I-p. 103-119
10/28	11:00	Pneumonia	Southwick	X		I-p. 79-99
	1:00 - 2:50	CMC-1 Respiratory Infections	ID faculty*	X
10/29		No MMID
10/30	11:00	Review	Gulig

11/2	12:30	Exam 2					CMC2 warm-up due 11:55 pm on Nov. 3 Introduction to Endocarditis, Tired Phage Therapist Introduction to Brain and Meningeal Infections (CNS), Stillborn Twin Sick Baby Intro. to Gastrointestinal Dis., Pasteur-ized Chef, Caesar Salad's Revenge, Day Care Diarrhea (review) CMC3 warm-up due 11:55 pm on Nov. 8
11/3	11:00	Otitis, Sinusitis, Meningitis Organisms	Gulig	X	X	S12,S13,S14, S61, S68
	1:00	Meningitis	Southwick	X		I-6
11/4	11:00	Otitis and Sinusitis Infections	Langdoc	X	X
	1:00	Endocarditis	Wang	X
11/5	11:00	Zoonoses	Gulig	X	X	S73, S25, S26, S28, S57 Lyme disease web page Yersinia self study exercise
	1:00	CMC-2 Endocarditis	ID faculty*
11/6	11:00	Enteric Organisms and Infections 1	Girón	X	X	S76, S11, S16, S17, S20

11/9	11:00	Enteric Organisms and Infections 2	Girón	"	X	Vibrio cholerae web learning	CMC3 warm-up due 11:55 pm on Nov. 8 Intro. to Zoonotic Diseases, Bull's Eye, Spotted Palms, Snake Hunter, Dumpster Kitty Joe Gloveless Great Boar Hunter Introduction to Skin Infections, Weak Weight Lifter Thorny Problem, Oiled Umbilicus
11/10	11:00	Enteric Organisms and Infections 3	Girón	"	X	Salmonella web page
	1:00	CMC-3 CNS Infections	ID faculty*			I-6
11/11		Veteran's Day				CMC4 warm-up due 11:55 pm Nov. 11
11/12	11:00	Enteric infections	Forsmark	X	X
11/13	11:00	Skin Pathogens	Jin	X	X
	1:00	CMC-4 GI Infections	ID faculty*

11/16		No MMID					Introduction to Genital and Urinary Tract Infections, Suspicious Spots, Leaky Faucet, Pain in the Side, See Dick, See Jane (review)
11/17	10:00	STD Video	Poff	X	X	CMC5 warm-up due 11:55 pm Nov. 17
11/18	10:00	STD Infections	Duff	X	X
11/19	11:00	UTI	Schain	X	X
	1:00	CMC-5 GU Infections	ID faculty*
11/20		No MMID

11/23	10:00	Review	Gulig
11/24		No MMID
11/25	11:30	Exam 3
11/26		Thanksgiving
11/27		Thanksgiving

11/30	11:00	Basic Parasitology 1 Entamoeba page Ascaris page	Gulig	X	X	S51-55	Mycology Cases: Round Rash; Bats in the Belfry; Here Pretty Pigeon Parasitology Cases: Kiss of Death; Pharaoh's Revenge; Windy Professor, Pain in the Galapagos; Feverish Seaman; Blocked Bowel; Pain in the Missionary; Ants in the Pants?; Whipped!
	1:00	Basic Parasitology 2	Gulig	"	"	Bed Bug Page
	2:00	Clinical Parasitology 1	Archibald	X	X
12/1	11:00	Clinical Parasitology 2	Archibald	"	"
12/2	1:00	Basic Mycology	Lewin	X	X	S46-50
12/3	1:00	Clinical Mycology	Wingard	X	X
12/4	1:00	ID Patient Presentation	Duff

12/7	3:00	Review/Q&A	Gulig
12/10	10:00	Exam 4
12/11	8:00	Final Exam - NMBE

*Reading: S=Schaecter, I=Infectious Disease- A Short Course, # refers to chapter

1. BUGS Cases - Complete these exercises during the suggested time frame in the schedule above. Cases that are labeled with ** have unique material that is covered on exams. None of the cases for virology are assigned. Note that we take note of material that is reinforced in the BUGS and lecture, even if the case is not assigned.

3. Clinical Microbiology Conferences (CMC) - You have been assigned groups. Look over the Pre-CMC material, read the appropriate material from Infectious Disease in 30 Days, and submit the Pre-CMC Warmup by the assigned day (see schedule above and below). Your faculty leader may assign students to present cases or answer specific questions. This material is covered on our exams in the form of essay questions.
     Introduction
     CMC Group Assignments (link to Courses) - Please note break-up of Dr. Iovine's and Dr. Sankratri's groups on Oct. 28 only - see the room assignments immediately below.
     CMC Room Assignments - Please note - revised Oct. 26
     CMC Key Facts Wish List
     CMC Materials and Required Assignments - note new dates on warm-ups 2-5:
            CMC 1 - Pneumonias (Oct. 29, 1:00); Pre-CMC Warmup due Oct. 27, 5:00 pm
            CMC 2 - Endocarditis (Nov. 5, 1:00); Pre-CMC Warmup due Nov. 3, 11:55 pm
            CMC 3 - CNS Infections (Nov. 10, 1:00); Pre-CMC Warmup due Nov. 8, 11:55 pm
            CMC 4 - GI Infections (Nov. 13, 1:00); Pre-CMC Warmup due Nov. 11, 11:55 pm
            CMC 5 - GU Infections (Nov. 19, 1:00); Pre-CMC Warmup due Nov. 17, 11:55 pm